1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.06G234300

Glyma.06G234300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G234300
Cluster HCCA clusters: Cluster_415

Target Alias Description ECC score Gene Family Method Actions
447294 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_05223 No alias putative e3 ubiquitin-protein ligase hip1 0.02 Orthogroups_2024-Update
A4A49_05482 No alias e3 ubiquitin-protein ligase mbr1 0.03 Orthogroups_2024-Update
A4A49_09521 No alias e3 ubiquitin-protein ligase mbr2 0.03 Orthogroups_2024-Update
A4A49_14077 No alias putative e3 ubiquitin-protein ligase rhg1a 0.02 Orthogroups_2024-Update
A4A49_32086 No alias putative e3 ubiquitin-protein ligase rhg1a 0.04 Orthogroups_2024-Update
At4g34040 No alias E3 ubiquitin-protein ligase MBR2... 0.04 Orthogroups_2024-Update
Bradi2g34660 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g46070 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Brara.C00432.1 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 Orthogroups_2024-Update
Brara.I00979.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G061663 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G122223 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G165044 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G039800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G076600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G138700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G134600 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G198300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G240800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G101370.5 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G061010.9 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os05g07070 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g47670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g48970 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_20229g0010 No alias (at5g24870 : 184.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.009G100100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G247100.1 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 Orthogroups_2024-Update
Seita.5G263300.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G226600.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.006G240400.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G056500.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G221600.3 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc12g014070 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G53190.2) 0.03 Orthogroups_2024-Update
Solyc12g088740 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2) 0.03 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.03 Orthogroups_2024-Update
Sopen03g037790 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen08g002410 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 404 447
No external refs found!