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  5. Glyma.06G289300

Glyma.06G289300


Description : GBF\'s pro-rich region-interacting factor 1


Gene families : OG_42_0003250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G289300
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
A4A49_04028 No alias transcription activator glk1 0.03 Orthogroups_2024-Update
At5g44190 No alias Transcription activator GLK2... 0.05 Orthogroups_2024-Update
Bradi2g08287 No alias GBF\'s pro-rich region-interacting factor 1 0.03 Orthogroups_2024-Update
Brara.F03760.1 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G007770.1 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
HORVU0Hr1G010940.1 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G083690.3 No alias GARP subgroup GLK transcription factor 0.03 Orthogroups_2024-Update
MA_78829g0010 No alias (at2g20570 : 260.0) Encodes GLK1, Golden2-like 1, one of... 0.05 Orthogroups_2024-Update
PSME_00033877-RA No alias (at2g20570 : 259.0) Encodes GLK1, Golden2-like 1, one of... 0.04 Orthogroups_2024-Update
Pp1s31_317V6 No alias Golden 2-like protein 2 0.03 Orthogroups_2024-Update
Seita.4G156200.1 No alias GARP subgroup GLK transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G096300.1 No alias GARP subgroup GLK transcription factor 0.06 Orthogroups_2024-Update
Solyc10g008160 No alias Two-component response regulator-like APRR2 (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 178 227
No external refs found!