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  5. Solyc02g085830

Solyc02g085830


Description : Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *-* A0A061EIJ4_THECC)


Gene families : OG_42_0000752 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g085830
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
66879 No alias Regulator of Vps4 activity in the MVB pathway protein 0.02 Orthogroups_2024-Update
Brara.H02609.1 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting 0.03 Orthogroups_2024-Update
Glyma.01G004100 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Glyma.07G127800 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Glyma.18G297500 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 Orthogroups_2024-Update
Potri.017G113900 No alias Regulator of Vps4 activity in the MVB pathway protein 0.02 Orthogroups_2024-Update
Seita.9G120600.1 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005061 Ist1 18 177
No external refs found!