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  5. Glyma.07G009600

Glyma.07G009600


Description : heat shock protein 60-3A


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G009600
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
405358 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
AC215201.3_FG005 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
At2g28000 No alias SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] 0.03 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.04 Orthogroups_2024-Update
At3g13470 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.06 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.08 Orthogroups_2024-Update
At5g18820 No alias Chaperonin 60 subunit alpha 2, chloroplastic... 0.03 Orthogroups_2024-Update
At5g56500 No alias Chaperonin 60 subunit beta 3, chloroplastic... 0.06 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.07 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.08 Orthogroups_2024-Update
Brara.C02414.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.09 Orthogroups_2024-Update
Brara.H00053.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.01 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.04 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
HORVU2Hr1G077410.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
LOC_Os03g04970 No alias T-complex protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10436324g0010 No alias (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... 0.03 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.03 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Potri.010G135100 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Pp1s114_95V6 No alias rubisco subunit binding-protein alpha subunit 0.02 Orthogroups_2024-Update
Pp1s52_245V6 No alias -like atpase 0.02 Orthogroups_2024-Update
Seita.2G129300.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
Seita.3G163700.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.06 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.08 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc05g053470 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.03 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.05 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.03 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.09 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.01 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 53 554
No external refs found!