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  5. Glyma.07G024000

Glyma.07G024000


Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein


Gene families : OG_42_0001501 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G024000
Cluster HCCA clusters: Cluster_373

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G063300 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.03 Orthogroups_2024-Update
Solyc11g045130 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.04 Orthogroups_2024-Update
Sopen03g035930 No alias CAF1 family ribonuclease 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 16 140
IPR006941 RNase_CAF1 162 246
No external refs found!