Sopen09g022440

Description : Nuclear transport factor 2 (NTF2) domain

Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen09g022440
Cluster	HCCA clusters: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g22160	No alias	Nuclear transport factor 2 (NTF2) family protein with...	0.04	Orthogroups_2024-Update
Brara.F03365.1	No alias	mRNA endoribonuclease *(G3BP)	0.02	Orthogroups_2024-Update
Glyma.19G168200	No alias	Nuclear transport factor 2 (NTF2) family protein with...	0.02	Orthogroups_2024-Update
Glyma.20G025500	No alias	Nuclear transport factor 2 (NTF2) family protein with...	0.03	Orthogroups_2024-Update
PSME_00035817-RA	No alias	(at5g60980 : 275.0) Nuclear transport factor 2 (NTF2)...	0.03	Orthogroups_2024-Update
Seita.2G374100.1	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update
Seita.9G362600.1	No alias	mRNA endoribonuclease *(G3BP)	0.02	Orthogroups_2024-Update
Sobic.001G335500.1	No alias	mRNA endoribonuclease *(G3BP)	0.02	Orthogroups_2024-Update
Sobic.002G359900.1	No alias	mRNA endoribonuclease *(G3BP)	0.02	Orthogroups_2024-Update
Sobic.006G041100.2	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	305	363
IPR002075	NTF2	21	137

External Links

No external refs found!