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  5. Glyma.07G025800

Glyma.07G025800


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G025800
Cluster HCCA clusters: Cluster_463

Target Alias Description ECC score Gene Family Method Actions
At1g25470 No alias Ethylene-responsive transcription factor ERF116... 0.03 Orthogroups_2024-Update
Brara.C03783.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.J00210.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.K01031.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Cre07.g353500 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G099326 No alias ethylene response factor 7 0.03 Orthogroups_2024-Update
Glyma.04G217400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G117000 No alias erf domain protein 9 0.04 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G210500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os06g03670 No alias dehydration-responsive element-binding protein,... 0.03 Orthogroups_2024-Update
LOC_Os12g41060 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00042940-RA No alias (at1g53910 : 121.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
Potri.006G104200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Pp1s38_257V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.4G252600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g076370 No alias Dehydration-responsive element binding protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!