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  5. Glyma.07G060000

Glyma.07G060000


Description : ribosomal protein L5 B


Gene families : OG_42_0001609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Glycine release: Glyma.07G060000
Cluster HCCA clusters: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
144921 No alias ribosomal protein L5 0.05 Orthogroups_2024-Update
A4A49_19400 No alias 60s ribosomal protein l5 0.04 Orthogroups_2024-Update
At3g25520 No alias RPL5A [Source:UniProtKB/TrEMBL;Acc:A0A178V891] 0.05 Orthogroups_2024-Update
Bradi1g13630 No alias ribosomal protein L5 B 0.07 Orthogroups_2024-Update
Bradi4g13640 No alias ribosomal protein L5 0.1 Orthogroups_2024-Update
Brara.C04001.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.C04002.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Brara.F03014.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.G00424.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Cre14.g621450 No alias ribosomal protein L5 B 0.03 Orthogroups_2024-Update
HORVU2Hr1G073320.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
HORVU5Hr1G092630.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
LOC_Os01g67134 No alias ribosomal L18p/L5e family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_70965g0010 No alias (q6unt2|rl5_cucsa : 417.0) 60S ribosomal protein L5 -... 0.07 Orthogroups_2024-Update
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.04 Orthogroups_2024-Update
Potri.014G174000 No alias ribosomal protein L5 B 0.05 Orthogroups_2024-Update
Potri.019G099000 No alias ribosomal protein L5 B 0.03 Orthogroups_2024-Update
Pp1s364_3V6 No alias ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s38_329V6 No alias ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s97_115V6 No alias ribosomal protein 0.1 Orthogroups_2024-Update
Seita.5G413500.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.003G387900.1 No alias component *(uL18) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Solyc06g007670 No alias 60S ribosomal protein L5 (AHRD V3.3 *** RL5_CUCSA) 0.09 Orthogroups_2024-Update
Solyc06g082870 No alias 60S ribosomal protein L5-like protein (AHRD V3.3 ***... 0.1 Orthogroups_2024-Update
Sopen06g034230 No alias Ribosomal L18p/L5e family 0.04 Orthogroups_2024-Update
Sopen09g013020 No alias Ribosomal L18p/L5e family 0.03 Orthogroups_2024-Update
evm.model.contig_3443.5 No alias (q6unt2|rl5_cucsa : 302.0) 60S ribosomal protein L5 -... 0.1 Orthogroups_2024-Update
evm.model.tig00000194.49 No alias (o65353|rl5_helan : 322.0) 60S ribosomal protein L5 -... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0008097 5S rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 191 280
IPR005485 Rbsml_L5_euk/L18_arc 14 175
No external refs found!