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  5. Glyma.07G068600

Glyma.07G068600


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G068600
Cluster HCCA clusters: Cluster_372

Target Alias Description ECC score Gene Family Method Actions
A4A49_00959 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_18851 No alias pentatricopeptide repeat-containing protein 0.02 Orthogroups_2024-Update
A4A49_23672 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.05 Orthogroups_2024-Update
At2g03880 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Orthogroups_2024-Update
At4g21300 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 Orthogroups_2024-Update
Bradi2g53450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g22520 No alias mitochondrial editing factor 22 0.03 Orthogroups_2024-Update
Brara.C00179.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.E03381.1 No alias RNA editing factor *(MEF19) 0.04 Orthogroups_2024-Update
Brara.F00971.1 No alias Unknown function 0.06 Orthogroups_2024-Update
GRMZM2G030148 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G045154 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G073017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G332843 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G456114 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G226200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G213800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Orthogroups_2024-Update
Glyma.09G160300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G313300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G154600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G053030.5 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G084530.3 No alias RNA editing factor *(SLO4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G040610.4 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os01g68490 No alias tetratricopeptide-like helical, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g07050 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g30710 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001133-RA No alias (at2g03880 : 550.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00001413-RA No alias (at4g18750 : 525.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00013106-RA No alias (at4g13650 : 681.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00015055-RA No alias (at1g11290 : 619.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00024026-RA No alias (at4g20770 : 565.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00030552-RA No alias (at4g18750 : 502.0) Encodes a pentatricopeptide (PPR)... 0.05 Orthogroups_2024-Update
PSME_00036890-RA No alias (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00046485-RA No alias (at4g18750 : 683.0) Encodes a pentatricopeptide (PPR)... 0.06 Orthogroups_2024-Update
PSME_00047047-RA No alias (at1g11290 : 654.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00048766-RA No alias (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00056460-RA No alias (at4g21300 : 575.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00057163-RA No alias (at1g11290 : 707.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
Potri.001G075800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G006800 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Potri.005G202600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G052200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Potri.010G241100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G097000 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Potri.014G191200 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G053500 No alias mitochondrial RNAediting factor 1 0.02 Orthogroups_2024-Update
Potri.016G075000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G147900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Pp1s103_35V6 No alias MZB10.7; pentatricopeptide (PPR) repeat-containing... 0.05 Orthogroups_2024-Update
Seita.1G215700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G068700.1 No alias RNA editing factor *(CRR28) 0.02 Orthogroups_2024-Update
Seita.7G139500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G213100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.9G489500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G444200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G385200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G403500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.03 Orthogroups_2024-Update
Sobic.003G182501.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.006G153300.2 No alias RNA editing factor *(MEF21) 0.06 Orthogroups_2024-Update
Sobic.010G097700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g008480 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g096510 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen01g039430 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 390 422
IPR002885 Pentatricopeptide_repeat 220 268
IPR002885 Pentatricopeptide_repeat 119 165
IPR002885 Pentatricopeptide_repeat 296 317
IPR002885 Pentatricopeptide_repeat 361 386
IPR002885 Pentatricopeptide_repeat 194 216
IPR002885 Pentatricopeptide_repeat 324 350
No external refs found!