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  5. Glyma.07G093100

Glyma.07G093100


Description : associated molecule with the SH3 domain of STAM 1


Gene families : OG_42_0001868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001868_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G093100
Cluster HCCA clusters: Cluster_419

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12550 No alias associated molecule with the SH3 domain of STAM 3 0.03 Orthogroups_2024-Update
Glyma.05G237800 No alias associated molecule with the SH3 domain of STAM 1 0.03 Orthogroups_2024-Update
Glyma.08G044900 No alias associated molecule with the SH3 domain of STAM 1 0.04 Orthogroups_2024-Update
Glyma.09G183100 No alias associated molecule with the SH3 domain of STAM 1 0.03 Orthogroups_2024-Update
PSME_00007028-RA No alias (at1g48790 : 395.0) associated molecule with the SH3... 0.03 Orthogroups_2024-Update
Potri.010G041200 No alias associated molecule with the SH3 domain of STAM 2 0.04 Orthogroups_2024-Update
Potri.010G141100 No alias associated molecule with the SH3 domain of STAM 3 0.03 Orthogroups_2024-Update
Solyc03g119330 No alias AMSH-like ubiquitin thioesterase 1 (AHRD V3.3 ***... 0.08 Orthogroups_2024-Update
evm.model.tig00000248.12 No alias (at4g16144 : 130.0) Encodes AMSH3, a deubiquitinating... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015063 USP8_dimer 15 105
IPR000555 JAMM/MPN+_dom 344 448
No external refs found!