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  5. Glyma.07G125100

Glyma.07G125100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G125100
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
A4A49_03685 No alias putative pectinesterase 53 0.05 Orthogroups_2024-Update
At1g11590 No alias Probable pectinesterase/pectinesterase inhibitor 19... 0.03 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.04 Orthogroups_2024-Update
At5g18990 No alias Probable pectinesterase 55... 0.03 Orthogroups_2024-Update
At5g19730 No alias Probable pectinesterase 53... 0.03 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.C03630.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J01617.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.03 Orthogroups_2024-Update
Glyma.01G066300 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.04 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
MA_10428625g0010 No alias (at3g29090 : 374.0) Encodes an atypical pectin... 0.04 Orthogroups_2024-Update
Mp2g01420.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Potri.003G076900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.006G120100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G115200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s446_3V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_89V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.2G137200.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Seita.8G237600.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Solyc10g083820 No alias Pectinesterase (AHRD V3.3 *** A0A068V420_COFCA) 0.03 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048580 regulation of post-embryonic development IEP Predicted GO
BP GO:0048582 positive regulation of post-embryonic development IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0051094 positive regulation of developmental process IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
BP GO:0051240 positive regulation of multicellular organismal process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
BP GO:2000038 regulation of stomatal complex development IEP Predicted GO
BP GO:2000123 positive regulation of stomatal complex development IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 150 435
No external refs found!