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  5. Glyma.07G132800

Glyma.07G132800


Description : RHOMBOID-like 1


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G132800
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Brara.J02499.1 No alias protease *(RBL) 0.04 Orthogroups_2024-Update
Glyma.18G181800 No alias RHOMBOID-like 1 0.03 Orthogroups_2024-Update
LOC_Os04g48130 No alias OsRhmbd11 - Putative Rhomboid homologue, expressed 0.03 Orthogroups_2024-Update
PSME_00033639-RA No alias (at2g29050 : 182.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00034704-RA No alias (at2g29050 : 143.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00049830-RA No alias (at2g29050 : 216.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.03 Orthogroups_2024-Update
Pp1s72_274V6 No alias membrane protein 0.03 Orthogroups_2024-Update
Seita.9G349500.1 No alias protease *(RBL) 0.03 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.05 Orthogroups_2024-Update
Sobic.001G532200.1 No alias protease *(RBL) 0.02 Orthogroups_2024-Update
Solyc03g026080 No alias Rhomboid-like protein (AHRD V3.3 *** K4BF81_SOLLC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 129 269
No external refs found!