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  5. Glyma.07G160600

Glyma.07G160600


Description : PIF1 helicase


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G160600
Cluster HCCA clusters: Cluster_556

Target Alias Description ECC score Gene Family Method Actions
Brara.B02726.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D00782.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I04085.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.K01119.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K01563.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.10G108261 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.16G109000 No alias PIF1 helicase 0.01 Orthogroups_2024-Update
LOC_Os01g62100 No alias retrotransposon protein, putative, unclassified, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g09490 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Seita.6G104400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g055520 No alias AT hook motif-containing protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g017560 No alias LOW QUALITY:AT hook motif-containing protein, putative... 0.02 Orthogroups_2024-Update
Sopen08g012630 No alias Helitron helicase-like domain at N-terminus 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
MF GO:0003678 DNA helicase activity IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 127 310
IPR003840 DNA_helicase 358 403
No external refs found!