Description : PIF1 helicase
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.07G171700 | |
Cluster | HCCA clusters: Cluster_550 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D00782.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.K00009.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Brara.K01119.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.K01356.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Glyma.01G057801 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
Glyma.01G135100 | No alias | PIF1 helicase | 0.07 | Orthogroups_2024-Update | |
Glyma.04G116000 | No alias | PIF1 helicase | 0.07 | Orthogroups_2024-Update | |
Glyma.05G078600 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Glyma.09G061100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.09G080200 | No alias | PIF1 helicase | 0.07 | Orthogroups_2024-Update | |
Glyma.10G108221 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
Glyma.10G108261 | No alias | PIF1 helicase | 0.04 | Orthogroups_2024-Update | |
Glyma.12G111300 | No alias | PIF1 helicase | 0.07 | Orthogroups_2024-Update | |
Glyma.13G024401 | No alias | PIF1 helicase | 0.05 | Orthogroups_2024-Update | |
Glyma.13G154900 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.15G197401 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Glyma.16G109000 | No alias | PIF1 helicase | 0.08 | Orthogroups_2024-Update | |
Glyma.19G051300 | No alias | PIF1 helicase | 0.06 | Orthogroups_2024-Update | |
Glyma.20G059700 | No alias | Function unknown | 0.08 | Orthogroups_2024-Update | |
LOC_Os10g31990 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g44014 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os12g23030 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
Seita.1G145600.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.1G149400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.2G180800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.3G310800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.3G320800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.4G159100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.6G097900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.6G126900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G193900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.9G083700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc01g017850 | No alias | LOW QUALITY:PIF1-like helicase (AHRD V3.3 *-* A0A072TJC6_MEDTR) | 0.04 | Orthogroups_2024-Update | |
Solyc01g057480 | No alias | PIF1 helicase (AHRD V3.3 *-* G7J5Q6_MEDTR) | 0.04 | Orthogroups_2024-Update | |
Solyc07g032810 | No alias | LOW QUALITY:Helicase-like protein (AHRD V3.3 *-* Q9AYF0_ORYSJ) | 0.04 | Orthogroups_2024-Update | |
Solyc11g044580 | No alias | AT hook motif-containing protein, putative, expressed... | 0.04 | Orthogroups_2024-Update | |
Sopen11g011570 | No alias | PIF1-like helicase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0009966 | regulation of signal transduction | IEP | Predicted GO |
BP | GO:0010646 | regulation of cell communication | IEP | Predicted GO |
MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
MF | GO:0016301 | kinase activity | IEP | Predicted GO |
BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
BP | GO:0023051 | regulation of signaling | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0036211 | protein modification process | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
MF | GO:0045735 | nutrient reservoir activity | IEP | Predicted GO |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010285 | DNA_helicase_pif1-like | 271 | 408 |
No external refs found! |