1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.07G173300

Glyma.07G173300


Description : ATP binding;nucleic acid binding;helicases


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G173300
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_33758 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
At1g62590 No alias Pentatricopeptide repeat-containing protein At1g62590... 0.03 Orthogroups_2024-Update
Glyma.09G174800 No alias ATP binding;nucleic acid binding;helicases 0.04 Orthogroups_2024-Update
Glyma.09G175800 No alias ATP binding;nucleic acid binding;helicases 0.02 Orthogroups_2024-Update
Glyma.16G206551 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 511 557
IPR002885 Pentatricopeptide_repeat 159 208
IPR002885 Pentatricopeptide_repeat 335 384
IPR002885 Pentatricopeptide_repeat 265 314
IPR002885 Pentatricopeptide_repeat 405 454
IPR002885 Pentatricopeptide_repeat 232 258
IPR002885 Pentatricopeptide_repeat 472 501
No external refs found!