Glyma.07G188700


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0008941 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G188700
Cluster HCCA clusters: Cluster_410

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g03930 No alias expressed protein 0.03 Orthogroups_2024-Update
Sobic.004G030600.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 378 401
IPR002885 Pentatricopeptide_repeat 431 478
IPR002885 Pentatricopeptide_repeat 311 358
IPR002885 Pentatricopeptide_repeat 501 550
IPR002885 Pentatricopeptide_repeat 156 204
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 51 72
IPR002885 Pentatricopeptide_repeat 405 428
IPR002885 Pentatricopeptide_repeat 232 248
IPR002885 Pentatricopeptide_repeat 267 294
No external refs found!