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  5. Glyma.07G194800

Glyma.07G194800


Description : C-terminal domain phosphatase-like 1


Gene families : OG_42_0002313 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G194800
Cluster HCCA clusters: Cluster_370

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G120373 No alias C-terminal domain phosphatase-like 1 0.02 Orthogroups_2024-Update
Glyma.13G181700 No alias C-terminal domain phosphatase-like 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G084640.7 No alias subcluster CPL phosphatase & group-I RNA polymerase-II... 0.03 Orthogroups_2024-Update
Pp1s42_277V6 No alias double-stranded rna binding 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004274 FCP1_dom 246 356
IPR014720 dsRBD_dom 839 902
IPR014720 dsRBD_dom 702 765
No external refs found!