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  5. Sopen09g024030

Sopen09g024030


Description : WD domain, G-beta repeat


Gene families : OG_42_0000674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g024030
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
A4A49_38252 No alias transcriptional corepressor leunig-like protein 0.01 Orthogroups_2024-Update
GRMZM2G361398 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.03 Orthogroups_2024-Update
Glyma.05G071000 No alias LEUNIG_homolog 0.02 Orthogroups_2024-Update
Glyma.10G102400 No alias LEUNIG_homolog 0.02 Orthogroups_2024-Update
HORVU6Hr1G089700.3 No alias component *(LUG/LUH) of transcriptional co-repressor complex 0.02 Orthogroups_2024-Update
MA_187232g0010 No alias (at2g32700 : 183.0) Encodes a WD40 repeat and LUFS... 0.02 Orthogroups_2024-Update
MA_950191g0010 No alias (at4g32551 : 286.0) LEUNIG regulates floral organ... 0.02 Orthogroups_2024-Update
PSME_00000602-RA No alias (at2g32700 : 652.0) Encodes a WD40 repeat and LUFS... 0.02 Orthogroups_2024-Update
PSME_00001956-RA No alias (at2g32700 : 616.0) Encodes a WD40 repeat and LUFS... 0.03 Orthogroups_2024-Update
Solyc05g026470 No alias transcriptional corepressor LEUNIG (AHRD V3.3 *-* AT4G32551.1) 0.02 Orthogroups_2024-Update
Solyc09g061290 No alias Transcriptional corepressor LEUNIG (AHRD V3.3 *** W9S398_9ROSA) 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 481 508
IPR001680 WD40_repeat 557 593
IPR001680 WD40_repeat 516 550
IPR001680 WD40_repeat 640 675
IPR006594 LisH 10 36
No external refs found!