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  5. Glyma.07G196300

Glyma.07G196300


Description : Uncharacterised protein family (UPF0497)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G196300
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
At4g20390 No alias CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0] 0.03 Orthogroups_2024-Update
Bradi2g12830 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Brara.C03372.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update
Brara.D02195.1 No alias lignin polymerization scaffold protein *(CASP) 0.04 Orthogroups_2024-Update
Glyma.02G109600 No alias Uncharacterised protein family (UPF0497) 0.04 Orthogroups_2024-Update
Glyma.07G251200 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Potri.008G088700 No alias Uncharacterised protein family (UPF0497) 0.02 Orthogroups_2024-Update
Seita.3G009500.1 No alias lignin polymerization scaffold protein *(CASP) 0.02 Orthogroups_2024-Update
Sopen06g028910 No alias Domain of unknown function (DUF588) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 5 141
No external refs found!