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  5. Glyma.07G219500

Glyma.07G219500


Description : Ribosomal S17 family protein


Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G219500
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
270936 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
At3g10610 No alias 40S ribosomal protein S17-3... 0.06 Orthogroups_2024-Update
At5g04800 No alias 40S ribosomal protein S17-4... 0.08 Orthogroups_2024-Update
Bradi3g29060 No alias Ribosomal S17 family protein 0.02 Orthogroups_2024-Update
Brara.B00154.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Brara.C00178.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Brara.E03000.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.J02711.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Cre12.g498250 No alias Ribosomal S17 family protein 0.14 Orthogroups_2024-Update
Glyma.02G200300 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
Glyma.10G076400 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G042220.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Kfl00038_0080 kfl00038_0080_v1.1 (at5g04800 : 192.0) Ribosomal S17 family protein;... 0.08 Orthogroups_2024-Update
LOC_Os03g01900 No alias 40S ribosomal protein S17, putative, expressed 0.03 Orthogroups_2024-Update
MA_184894g0010 No alias (at5g04800 : 212.0) Ribosomal S17 family protein;... 0.07 Orthogroups_2024-Update
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.18 Orthogroups_2024-Update
PSME_00034734-RA No alias (at5g04800 : 198.0) Ribosomal S17 family protein;... 0.07 Orthogroups_2024-Update
Potri.008G017300 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
Potri.010G241200 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
Pp1s2_290V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s2_298V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s39_286V6 No alias 40s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s39_287V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s76_75V6 No alias 40s ribosomal protein 0.12 Orthogroups_2024-Update
Seita.9G218400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Seita.9G497100.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Sobic.010G076400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.24 Orthogroups_2024-Update
Solyc05g055230 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.17 Orthogroups_2024-Update
Solyc11g006690 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.17 Orthogroups_2024-Update
Sopen05g033670 No alias Ribosomal S17 0.13 Orthogroups_2024-Update
Sopen10g032640 No alias Ribosomal S17 0.2 Orthogroups_2024-Update
Sopen11g002620 No alias Ribosomal S17 0.23 Orthogroups_2024-Update
evm.model.contig_2507.2 No alias (at2g05220 : 160.0) Ribosomal S17 family protein;... 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 120
No external refs found!