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  5. Glyma.07G226100

Glyma.07G226100


Description : QUASIMODO2 LIKE 1


Gene families : OG_42_0002771 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G226100
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Brara.B03158.1 No alias pectin methyltransferase *(QUA2) involved in... 0.03 Orthogroups_2024-Update
Glyma.06G102500 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
HORVU6Hr1G078130.13 No alias pectin methyltransferase *(QUA2) involved in... 0.03 Orthogroups_2024-Update
PSME_00012742-RA No alias (at1g78240 : 482.0) Encodes TSD2 (TUMOROUS SHOOT... 0.03 Orthogroups_2024-Update
Sobic.004G231300.1 No alias pectin methyltransferase *(QUA2) involved in... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 103 621
No external refs found!