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  5. Glyma.07G251800

Glyma.07G251800


Description : tubby like protein 3


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G251800
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g47640 No alias OsFBT4 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g36190 No alias OsFBT7 - F-box and tubby domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.008G195200 No alias tubby like protein 3 0.04 Orthogroups_2024-Update
Pp1s101_148V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Seita.3G227800.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G152200.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G195900.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g029820 No alias Tub family 0.03 Orthogroups_2024-Update
Sopen04g027720 No alias Tub family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 53
IPR000007 Tubby_C 69 354
No external refs found!