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  5. Glyma.07G265800

Glyma.07G265800


Description : F-box and associated interaction domains-containing protein


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G265800
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Bradi3g56200 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.06G181300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.08G252000 No alias F-box family protein 0.03 Orthogroups_2024-Update
Glyma.15G115100 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Potri.015G013800 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Sopen03g024680 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen07g027190 No alias F-box domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 195 283
IPR001810 F-box_dom 3 43
No external refs found!