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  5. Sopen09g024760

Sopen09g024760


Description : PPR repeat


Gene families : OG_42_0010570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g024760
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
MA_17644g0010 No alias (at2g17525 : 377.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 311 358
IPR002885 Pentatricopeptide_repeat 209 253
IPR002885 Pentatricopeptide_repeat 177 207
IPR002885 Pentatricopeptide_repeat 279 307
IPR002885 Pentatricopeptide_repeat 422 446
IPR033443 PPR_long 467 595
IPR002885 Pentatricopeptide_repeat 377 409
No external refs found!