1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.08G012700

Glyma.08G012700


Description : GATA type zinc finger transcription factor family protein


Gene families : OG_42_0000555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G012700
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
A4A49_37656 No alias lim domain-containing protein wlim2b 0.03 Orthogroups_2024-Update
A4A49_41054 No alias lim domain-containing protein plim2b 0.03 Orthogroups_2024-Update
Bradi5g16666 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.02G253700 No alias GATA type zinc finger transcription factor family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G028180.1 No alias LIM-type transcription factor 0.03 Orthogroups_2024-Update
Pp1s136_98V6 No alias pollen-specific protein 0.02 Orthogroups_2024-Update
Seita.1G250500.1 No alias LIM-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G097600.1 No alias LIM-type transcription factor 0.04 Orthogroups_2024-Update
Sopen05g028200 No alias LIM domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 104 159
IPR001781 Znf_LIM 10 65
No external refs found!