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  5. Glyma.08G053500

Glyma.08G053500


Description : Calcium-binding EF-hand family protein


Gene families : OG_42_0003948 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003948_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G053500
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_10708 No alias polcalcin nic t 1 0.03 Orthogroups_2024-Update
Glyma.14G216000 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 103 166
IPR002048 EF_hand_dom 31 94
No external refs found!