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  5. Glyma.08G078500

Glyma.08G078500


Description : Protein of unknown function (DUF640)


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G078500
Cluster HCCA clusters: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
At5g58500 No alias LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9] 0.04 Orthogroups_2024-Update
Brara.C02165.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Brara.G00513.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G058600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
HORVU6Hr1G058340.3 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00056987-RA No alias (at3g23290 : 226.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4);... 0.04 Orthogroups_2024-Update
Potri.019G018600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Pp1s10_72V6 No alias T16B12.3; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Solyc10g007310 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.06 Orthogroups_2024-Update
Solyc12g014260 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 44 161
No external refs found!