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  5. Glyma.08G079100

Glyma.08G079100


Description : polygalacturonase inhibiting protein 1


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G079100
Cluster HCCA clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
At1g33600 No alias Leucine-rich repeat (LRR) family protein... 0.02 Orthogroups_2024-Update
Brara.A03363.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Mp5g13350.1 No alias Probably inactive leucine-rich repeat receptor-like... 0.02 Orthogroups_2024-Update
Sobic.006G117500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g033300 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 24 63
No external refs found!