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  5. Glyma.08G080500

Glyma.08G080500


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G080500
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AC203909.3_FG007 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Bradi1g38270 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi5g17300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.G00588.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I01846.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
GRMZM2G348846 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G021740.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
HORVU7Hr1G093940.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
LOC_Os02g14090 No alias berberine and berberine like domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g35560 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10144220g0010 No alias (at5g44400 : 204.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033064-RA No alias (at4g20860 : 370.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G459200 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Potri.001G462600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G160900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.6G216800.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc03g006690 No alias LOW QUALITY:FAD-binding Berberine family protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g006430 No alias FAD binding domain 0.02 Orthogroups_2024-Update
Sopen03g002700 No alias Berberine and berberine like 0.02 Orthogroups_2024-Update
Sopen06g023570 No alias FAD binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 83 219
IPR012951 BBE 475 532
No external refs found!