1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.08G097600

Glyma.08G097600


Description : BED zinc finger ;hAT family dimerisation domain


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G097600
Cluster HCCA clusters: Cluster_410

Target Alias Description ECC score Gene Family Method Actions
Bradi1g57985 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.03G093900 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.17G167500 No alias BED zinc finger ;hAT family dimerisation domain 0.02 Orthogroups_2024-Update
LOC_Os03g14600 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sopen05g020330 No alias hAT family C-terminal dimerisation region 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 641 723
IPR025525 hAT-like_transposase_RNase-H 484 586
No external refs found!