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  5. Glyma.08G108900

Glyma.08G108900


Description : serine hydroxymethyltransferase 4


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G108900
Cluster HCCA clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_22571 No alias serine hydroxymethyltransferase 3, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_33285 No alias serine hydroxymethyltransferase, mitochondrial 0.04 Orthogroups_2024-Update
Bradi4g08097 No alias serine hydroxymethyltransferase 4 0.02 Orthogroups_2024-Update
Bradi4g19470 No alias serine hydroxymethyltransferase 4 0.05 Orthogroups_2024-Update
GRMZM2G078143 No alias serine hydroxymethyltransferase 4 0.03 Orthogroups_2024-Update
HORVU3Hr1G082070.3 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.03 Orthogroups_2024-Update
MA_730617g0010 No alias (at4g32520 : 720.0) Encodes a serine... 0.04 Orthogroups_2024-Update
Potri.017G059300 No alias serine hydroxymethyltransferase 4 0.03 Orthogroups_2024-Update
Seita.5G398800.1 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.05 Orthogroups_2024-Update
Sobic.005G113300.1 No alias serine hydroxymethyltransferase *(SHM) & EC_2.1... 0.03 Orthogroups_2024-Update
Solyc02g091560 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** A0A0R4J3Y9_SOYBN) 0.03 Orthogroups_2024-Update
evm.model.tig00000144.148 No alias (p34899|glym_pea : 382.0) Serine... 0.02 Orthogroups_2024-Update
evm.model.tig00001130.31 No alias (at4g13930 : 555.0) Encodes a serine... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000813 ESCRT I complex IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 13 411
No external refs found!