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  5. Glyma.08G111200

Glyma.08G111200


Description : RAB geranylgeranyl transferase beta subunit 1


Gene families : OG_42_0004916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G111200
Cluster HCCA clusters: Cluster_493

Target Alias Description ECC score Gene Family Method Actions
Cre01.g053500 No alias RAB geranylgeranyl transferase beta subunit 2 0.04 Orthogroups_2024-Update
LOC_Os08g40140 No alias geranylgeranyl transferase type-2 subunit beta,... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 245 287
IPR001330 PFTB_repeat 197 239
IPR001330 PFTB_repeat 148 191
IPR001330 PFTB_repeat 100 143
IPR001330 PFTB_repeat 53 93
No external refs found!