Glyma.08G115100

Description : tubulin alpha-5

Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.08G115100
Cluster	HCCA clusters: Cluster_311

Target	Alias	Description	ECC score	Gene Family Method
178975	No alias	tubulin alpha-2 chain	0.02	Orthogroups_2024-Update
227365	No alias	tubulin alpha-2 chain	0.02	Orthogroups_2024-Update
Mp1g24530.1	No alias	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
Mp2g23500.1	No alias	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	Orthogroups_2024-Update
Pp1s131_7V6	No alias	alpha tubulin 1	0.03	Orthogroups_2024-Update
Sopen00g003710	No alias	Tubulin/FtsZ family, GTPase domain	0.05	Orthogroups_2024-Update
Sopen12g030180	No alias	Tubulin/FtsZ family, GTPase domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0003951	NAD+ kinase activity	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0006741	NADP biosynthetic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	213
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	263	392

External Links

No external refs found!