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  5. Glyma.08G117100

Glyma.08G117100


Description : Xanthine/uracil permease family protein


Gene families : OG_42_0000409 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G117100
Cluster HCCA clusters: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
At2g34190 No alias Nucleobase-ascorbate transporter 2... 0.05 Orthogroups_2024-Update
Solyc02g072500 No alias Nucleobase-ascorbate transporter-like protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen02g021470 No alias Permease family 0.04 Orthogroups_2024-Update
Sopen05g002050 No alias Permease family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0030915 Smc5-Smc6 complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
CC GO:0106068 SUMO ligase complex IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006043 Xant/urac/vitC 32 436
No external refs found!