Glyma.08G129200

Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.08G129200
Cluster	HCCA clusters: Cluster_377

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.10G171900	No alias	Transcription factor jumonji (jmj) family protein / zinc...	0.07	Orthogroups_2024-Update
HORVU1Hr1G030740.16	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003347	JmjC_dom	297	413
IPR003888	FYrich_N	820	864
IPR003889	FYrich_C	871	957
IPR003349	JmjN	57	90
IPR004198	Znf_C5HC2	520	571

External Links

No external refs found!