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  5. Glyma.08G135200

Glyma.08G135200


Description : signal responsive 1


Gene families : OG_42_0000777 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G135200
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Bradi1g60817 No alias Calmodulin-binding transcription activator protein with... 0.02 Orthogroups_2024-Update
Brara.G02700.1 No alias CAMTA-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.08G178900 No alias Calmodulin-binding transcription activator protein with... 0.03 Orthogroups_2024-Update
Glyma.18G005100 No alias Calmodulin-binding transcription activator protein with... 0.03 Orthogroups_2024-Update
LOC_Os07g43030 No alias calmodulin-binding transcription activator, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s188_92V6 No alias calmodulin-binding transcription activator 0.02 Orthogroups_2024-Update
Seita.9G380100.1 No alias CAMTA-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G261501.1 No alias CAMTA-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G351700.1 No alias CAMTA-type transcription factor 0.07 Orthogroups_2024-Update
Sobic.006G051800.1 No alias CAMTA-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g056270 No alias ER66 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 726 822
IPR000048 IQ_motif_EF-hand-BS 952 969
IPR000048 IQ_motif_EF-hand-BS 928 947
IPR005559 CG-1_dom 21 134
IPR002909 IPT_dom 520 596
No external refs found!