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  5. Glyma.08G139300

Glyma.08G139300


Description : binding


Gene families : OG_42_0001151 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G139300
Cluster HCCA clusters: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G019600 No alias binding 0.04 Orthogroups_2024-Update
HORVU4Hr1G017340.2 No alias cellulose synthase CSC-interactive protein *(CSI) 0.02 Orthogroups_2024-Update
HORVU4Hr1G017370.1 No alias cellulose synthase CSC-interactive protein *(CSI) 0.04 Orthogroups_2024-Update
PSME_00010221-RA No alias (at2g22125 : 313.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update
PSME_00022884-RA No alias (at2g22125 : 2563.0) binding; FUNCTIONS IN: binding;... 0.06 Orthogroups_2024-Update
Pp1s20_50V6 No alias armadillo beta-catenin-like repeat familyexpressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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oltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/703748">Glyma.18GGO
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEPPredicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 2030 2119
IPR000225 Armadillo 525 564
IPR000225 Armadillo 104 134
No external refs found!