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  5. Glyma.08G153800

Glyma.08G153800


Description : zinc finger (CCCH-type/C3HC4-type RING finger) family protein


Gene families : OG_42_0003826 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003826_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G153800
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Glyma.15G272400 No alias zinc finger (CCCH-type/C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 210 267
No external refs found!