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  5. Sopen09g026450

Sopen09g026450


Description : Domain of unknown function (DUF1985)


Gene families : OG_42_0000749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g026450
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Solyc01g010090 No alias Dof-type zinc finger DNA-binding family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc01g016480 No alias No description available 0.05 Orthogroups_2024-Update
Solyc03g034210 No alias No description available 0.03 Orthogroups_2024-Update
Solyc04g051520 No alias No description available 0.04 Orthogroups_2024-Update
Solyc08g061030 No alias DNA-directed RNA polymerase subunit beta'' (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc10g054120 No alias LOW QUALITY:cellulose synthase, putative (DUF1644) (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 871 1042
IPR015410 DUF1985 131 268
No external refs found!