Description : light harvesting complex photosystem II subunit 6
Gene families : OG_42_0005004 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.08G180000 | |
Cluster | HCCA clusters: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
271833 | No alias | light harvesting complex photosystem II subunit 6 | 0.03 | Orthogroups_2024-Update | |
A4A49_19796 | No alias | chlorophyll a-b binding protein cp24 10a, chloroplastic | 0.08 | Orthogroups_2024-Update | |
At1g15820 | No alias | Chlorophyll a-b binding protein, chloroplastic... | 0.08 | Orthogroups_2024-Update | |
Bradi5g12150 | No alias | light harvesting complex photosystem II subunit 6 | 0.08 | Orthogroups_2024-Update | |
Brara.F01095.1 | No alias | component *(LHCb6) of LHC-II complex | 0.08 | Orthogroups_2024-Update | |
Brara.H02525.1 | No alias | component *(LHCb6) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
Brara.I04910.1 | No alias | component *(LHCb6) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
GRMZM2G088983 | No alias | light harvesting complex photosystem II subunit 6 | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G079920.4 | No alias | component *(LHCb6) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
Kfl00276_0010 | kfl00276_0010_v1.1 | (at1g15820 : 338.0) Lhcb6 protein (Lhcb6), light... | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g38410 | No alias | chlorophyll A-B binding protein, putative, expressed | 0.08 | Orthogroups_2024-Update | |
Mp6g01650.1 | No alias | component LHCb6 of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
Potri.001G210000 | No alias | light harvesting complex photosystem II subunit 6 | 0.04 | Orthogroups_2024-Update | |
Pp1s28_315V6 | No alias | chloroplast light-harvesting complex ii protein | 0.12 | Orthogroups_2024-Update | |
Pp1s28_319V6 | No alias | chloroplast light-harvesting complex ii protein | 0.07 | Orthogroups_2024-Update | |
Seita.7G121800.1 | No alias | component *(LHCb6) of LHC-II complex | 0.08 | Orthogroups_2024-Update | |
Sobic.006G264201.1 | No alias | component *(LHCb6) of LHC-II complex | 0.07 | Orthogroups_2024-Update | |
Solyc01g105030 | No alias | Chlorophyll a-b binding protein, chloroplastic (AHRD... | 0.12 | Orthogroups_2024-Update | |
Solyc01g105050 | No alias | Chlorophyll a-b binding protein, chloroplastic (AHRD... | 0.1 | Orthogroups_2024-Update | |
Sopen01g047560 | No alias | Chlorophyll A-B binding protein | 0.08 | Orthogroups_2024-Update | |
Sopen01g047580 | No alias | Chlorophyll A-B binding protein | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006814 | sodium ion transport | IEP | Predicted GO |
BP | GO:0006873 | cellular ion homeostasis | IEP | Predicted GO |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | Predicted GO |
BP | GO:0006879 | cellular iron ion homeostasis | IEP | Predicted GO |
MF | GO:0008199 | ferric iron binding | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009538 | photosystem I reaction center | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0010109 | regulation of photosynthesis | IEP | Predicted GO |
BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
MF | GO:0010242 | oxygen evolving activity | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
BP | GO:0030003 | cellular cation homeostasis | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Predicted GO |
BP | GO:0042549 | photosystem II stabilization | IEP | Predicted GO |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Predicted GO |
BP | GO:0048878 | chemical homeostasis | IEP | Predicted GO |
BP | GO:0050801 | ion homeostasis | IEP | Predicted GO |
BP | GO:0055065 | metal ion homeostasis | IEP | Predicted GO |
BP | GO:0055072 | iron ion homeostasis | IEP | Predicted GO |
BP | GO:0055076 | transition metal ion homeostasis | IEP | Predicted GO |
BP | GO:0055080 | cation homeostasis | IEP | Predicted GO |
BP | GO:0055082 | cellular chemical homeostasis | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
BP | GO:0098771 | inorganic ion homeostasis | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 73 | 249 |
No external refs found! |