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Description : Ribosomal L28e protein family
Gene families : OG_42_0002199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002199_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.08G196500 | |
| Cluster | HCCA clusters: Cluster_76 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 164298 | No alias | Ribosomal L28e protein family | 0.12 | Orthogroups_2024-Update | |
| A4A49_23451 | No alias | 60s ribosomal protein l28-1 | 0.07 | Orthogroups_2024-Update | |
| A4A49_64591 | No alias | 60s ribosomal protein l28-1 | 0.11 | Orthogroups_2024-Update | |
| Bradi2g18150 | No alias | Ribosomal L28e protein family | 0.05 | Orthogroups_2024-Update | |
| Bradi2g47760 | No alias | Ribosomal L28e protein family | 0.07 | Orthogroups_2024-Update | |
| Brara.A00789.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Brara.G00081.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
| Brara.H01443.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
| Brara.I01133.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Brara.I04724.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
| Cre11.g467578 | No alias | Ribosomal L28e protein family | 0.17 | Orthogroups_2024-Update | |
| HORVU1Hr1G079370.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| HORVU3Hr1G066430.3 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
| Kfl00166_0150 | kfl00166_0150_v1.1 | (at4g29410 : 108.0) Ribosomal L28e protein family;... | 0.13 | Orthogroups_2024-Update | |
| LOC_Os01g51020 | No alias | 60S ribosomal protein L28-1, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_10428490g0010 | No alias | (at2g19730 : 181.0) Ribosomal L28e protein family;... | 0.09 | Orthogroups_2024-Update | |
| Mp1g26940.1 | No alias | component RPL28 of LSU proteome component | 0.12 | Orthogroups_2024-Update | |
| PSME_00007702-RA | No alias | (at2g19730 : 186.0) Ribosomal L28e protein family;... | 0.05 | Orthogroups_2024-Update | |
| Potri.001G194000 | No alias | Ribosomal L28e protein family | 0.06 | Orthogroups_2024-Update | |
| Potri.T165500 | No alias | Ribosomal L28e protein family | 0.06 | Orthogroups_2024-Update | |
| Pp1s21_390V6 | No alias | 60s ribosomal protein l28 | 0.03 | Orthogroups_2024-Update | |
| Pp1s505_8V6 | No alias | 60s ribosomal protein l28 | 0.17 | Orthogroups_2024-Update | |
| Pp1s7_390V6 | No alias | 60s ribosomal protein l28 | 0.13 | Orthogroups_2024-Update | |
| Pp1s98_65V6 | No alias | 60s ribosomal protein l28 | 0.08 | Orthogroups_2024-Update | |
| Seita.3G162800.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
| Seita.5G288600.1 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Sobic.009G215200.2 | No alias | component *(eL28) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
| Solyc03g121330 | No alias | 60S ribosomal protein L28, putative (AHRD V3.3 *** B9RKC5_RICCO) | 0.16 | Orthogroups_2024-Update | |
| Sopen03g040140 | No alias | Ribosomal L28e protein family | 0.16 | Orthogroups_2024-Update | |
| Sopen12g022910 | No alias | Ribosomal L28e protein family | 0.1 | Orthogroups_2024-Update | |
| evm.model.contig_471.3 | No alias | no hits & (original description: no original description) | 0.14 | Orthogroups_2024-Update | |
| evm.model.tig00020710.93 | No alias | no hits & (original description: no original description) | 0.14 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006457 | protein folding | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029004 | L28e/Mak16 | 8 | 128 |
| No external refs found! |