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  5. Glyma.08G204800

Glyma.08G204800


Description : photosystem I subunit H2


Gene families : OG_42_0004367 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G204800
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_26930 No alias photosystem i reaction center subunit vi, chloroplastic 0.08 Orthogroups_2024-Update
A4A49_56724 No alias photosystem i reaction center subunit vi, chloroplastic 0.09 Orthogroups_2024-Update
At1g52230 No alias Photosystem I reaction center subunit VI-2,... 0.06 Orthogroups_2024-Update
At3g16140 No alias Photosystem I reaction center subunit VI-1,... 0.03 Orthogroups_2024-Update
Bradi2g16810 No alias photosystem I subunit H2 0.07 Orthogroups_2024-Update
Brara.A03077.1 No alias component *(PsaH) of PS-I complex 0.06 Orthogroups_2024-Update
Brara.E02538.1 No alias component *(PsaH) of PS-I complex 0.1 Orthogroups_2024-Update
Brara.F00205.1 No alias component *(PsaH) of PS-I complex 0.05 Orthogroups_2024-Update
Brara.H00177.1 No alias component *(PsaH) of PS-I complex 0.04 Orthogroups_2024-Update
Cre07.g330250 No alias photosystem I subunit H-1 0.07 Orthogroups_2024-Update
HORVU0Hr1G001490.2 No alias component *(PsaH) of PS-I complex 0.07 Orthogroups_2024-Update
MA_65259g0010 No alias (p20143|psah_horvu : 147.0) Photosystem I reaction... 0.05 Orthogroups_2024-Update
Mp7g13220.1 No alias component PsaH of PS-I complex 0.05 Orthogroups_2024-Update
PSME_00050341-RA No alias (o65101|psah_maize : 148.0) Photosystem I reaction... 0.05 Orthogroups_2024-Update
Potri.003G052500 No alias photosystem I subunit H2 0.03 Orthogroups_2024-Update
Pp1s206_11V6 No alias photosystem i reaction center subunit chloroplast 0.12 Orthogroups_2024-Update
Pp1s89_62V6 No alias photosystem i reaction center subunit chloroplast 0.11 Orthogroups_2024-Update
Seita.3G149000.1 No alias component *(PsaH) of PS-I complex 0.09 Orthogroups_2024-Update
Sobic.009G229700.1 No alias component *(PsaH) of PS-I complex 0.11 Orthogroups_2024-Update
Solyc03g120640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc06g066640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc12g044280 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen00g011820 No alias Photosystem I reaction centre subunit VI 0.09 Orthogroups_2024-Update
Sopen06g024910 No alias Photosystem I reaction centre subunit VI 0.04 Orthogroups_2024-Update
Sopen12g022520 No alias Photosystem I reaction centre subunit VI 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 7 144
No external refs found!