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  5. Glyma.08G205500

Glyma.08G205500


Description : Zinc-binding ribosomal protein family protein


Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G205500
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At1g15250 No alias 60S ribosomal protein L37-1... 0.05 Orthogroups_2024-Update
At1g52300 No alias 60S ribosomal protein L37-2... 0.03 Orthogroups_2024-Update
At3g16080 No alias 60S ribosomal protein L37-3... 0.04 Orthogroups_2024-Update
Bradi3g01190 No alias Zinc-binding ribosomal protein family protein 0.09 Orthogroups_2024-Update
Bradi3g55170 No alias Zinc-binding ribosomal protein family protein 0.09 Orthogroups_2024-Update
Brara.E01589.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.E02541.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.F00200.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.H00172.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Cre10.g430400 No alias Zinc-binding ribosomal protein family protein 0.11 Orthogroups_2024-Update
GRMZM2G168674 No alias Zinc-binding ribosomal protein family protein 0.1 Orthogroups_2024-Update
Glyma.07G004900 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G005390.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
HORVU6Hr1G090070.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Kfl00864_0030 kfl00864_0030_v1.1 (at3g16080 : 136.0) Zinc-binding ribosomal protein... 0.04 Orthogroups_2024-Update
MA_129829g0010 No alias (at3g16080 : 128.0) Zinc-binding ribosomal protein... 0.09 Orthogroups_2024-Update
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.13 Orthogroups_2024-Update
PSME_00050791-RA No alias (at3g16080 : 155.0) Zinc-binding ribosomal protein... 0.1 Orthogroups_2024-Update
Potri.006G243300 No alias Zinc-binding ribosomal protein family protein 0.1 Orthogroups_2024-Update
Potri.018G036900 No alias Zinc-binding ribosomal protein family protein 0.08 Orthogroups_2024-Update
Pp1s152_133V6 No alias 60s ribosomal protein l37 0.1 Orthogroups_2024-Update
Pp1s222_87V6 No alias 60s ribosomal protein l37 0.14 Orthogroups_2024-Update
Pp1s24_197V6 No alias 60s ribosomal protein l37 0.04 Orthogroups_2024-Update
Pp1s3_512V6 No alias 60s ribosomal protein l37 0.15 Orthogroups_2024-Update
Pp1s475_18V6 No alias 60s ribosomal protein l37 0.17 Orthogroups_2024-Update
Seita.1G119400.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.1G363500.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.001G347901.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Sobic.004G008400.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Solyc03g120780 No alias Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC) 0.1 Orthogroups_2024-Update
Solyc06g066660 No alias Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU) 0.07 Orthogroups_2024-Update
Solyc08g068180 No alias Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC) 0.09 Orthogroups_2024-Update
Sopen03g039600 No alias Ribosomal protein L37e 0.09 Orthogroups_2024-Update
Sopen06g024930 No alias Ribosomal protein L37e 0.12 Orthogroups_2024-Update
evm.model.tig00020610.80 No alias (at1g52300 : 115.0) Zinc-binding ribosomal protein... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 3 53
No external refs found!