1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen09g026890

Sopen09g026890


Description : NAD dependent epimerase/dehydratase family


Gene families : OG_42_0007181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007181_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g026890
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At3g63140 No alias Chloroplast stem-loop binding protein of 41 kDa a,... 0.03 Orthogroups_2024-Update
Bradi1g54030 No alias chloroplast stem-loop binding protein of 41 kDa 0.04 Orthogroups_2024-Update
Brara.D00026.1 No alias endoribonuclease *(CSP41) 0.08 Orthogroups_2024-Update
Glyma.02G147300 No alias chloroplast stem-loop binding protein of 41 kDa 0.08 Orthogroups_2024-Update
Glyma.10G026600 No alias chloroplast stem-loop binding protein of 41 kDa 0.05 Orthogroups_2024-Update
HORVU6Hr1G004860.10 No alias endoribonuclease *(CSP41) 0.04 Orthogroups_2024-Update
Kfl00387_0070 kfl00387_0070_v1.1 (at3g63140 : 374.0) Encodes a protein with ribonuclease... 0.03 Orthogroups_2024-Update
MA_307070g0010 No alias (at3g63140 : 176.0) Encodes a protein with ribonuclease... 0.05 Orthogroups_2024-Update
Potri.002G053000 No alias chloroplast stem-loop binding protein of 41 kDa 0.04 Orthogroups_2024-Update
Potri.005G209500 No alias chloroplast stem-loop binding protein of 41 kDa 0.09 Orthogroups_2024-Update
Pp1s55_140V6 No alias mrna-binding protein 0.06 Orthogroups_2024-Update
Sobic.002G077000.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Solyc09g065180 No alias binding protein precursor AF106660 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 88 298
No external refs found!