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  5. Glyma.08G211200

Glyma.08G211200


Description : Alba DNA/RNA-binding protein


Gene families : OG_42_0000995 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G211200
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At1g29250 No alias Alba DNA/RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q9LP53] 0.03 Orthogroups_2024-Update
Bradi3g07520 No alias Alba DNA/RNA-binding protein 0.05 Orthogroups_2024-Update
Brara.G00772.1 No alias R-loop reader protein *(ALBA1/2) 0.07 Orthogroups_2024-Update
Brara.H01960.1 No alias R-loop reader protein *(ALBA1/2) 0.11 Orthogroups_2024-Update
GRMZM2G098335 No alias Alba DNA/RNA-binding protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G037940.3 No alias R-loop reader protein *(ALBA1/2) 0.05 Orthogroups_2024-Update
LOC_Os06g40040 No alias protein of unknown function domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00030199-RA No alias (at1g29250 : 177.0) Alba DNA/RNA-binding protein;... 0.02 Orthogroups_2024-Update
Potri.006G252000 No alias Alba DNA/RNA-binding protein 0.04 Orthogroups_2024-Update
Potri.018G029300 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
Seita.1G044100.1 No alias R-loop reader protein *(ALBA1/2) 0.05 Orthogroups_2024-Update
Seita.4G223700.1 No alias R-loop reader protein *(ALBA1/2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 31 91
No external refs found!