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  5. Glyma.08G226600

Glyma.08G226600


Description : high chlorophyll fluorescence phenotype 173


Gene families : OG_42_0005535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G226600
Cluster HCCA clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
At1g16720 No alias high chlorophyll fluorescence phenotype 173... 0.05 Orthogroups_2024-Update
Bradi1g34525 No alias high chlorophyll fluorescence phenotype 173 0.07 Orthogroups_2024-Update
Brara.F01166.1 No alias protein involved in PS-II assembly *(HCF173) 0.05 Orthogroups_2024-Update
Glyma.07G000500 No alias high chlorophyll fluorescence phenotype 173 0.06 Orthogroups_2024-Update
HORVU7Hr1G096250.1 No alias protein involved in PS-II assembly *(HCF173) 0.03 Orthogroups_2024-Update
LOC_Os02g04510 No alias UOS1, putative, expressed 0.04 Orthogroups_2024-Update
Potri.007G003500 No alias high chlorophyll fluorescence phenotype 173 0.03 Orthogroups_2024-Update
Potri.014G000400 No alias high chlorophyll fluorescence phenotype 173 0.05 Orthogroups_2024-Update
Pp1s326_65V6 No alias F17F16.7; expressed protein [Arabidopsis thaliana] 0.09 Orthogroups_2024-Update
Seita.4G271300.1 No alias protein involved in PS-II assembly *(HCF173) 0.05 Orthogroups_2024-Update
Sobic.010G255300.2 No alias protein involved in PS-II assembly *(HCF173) 0.04 Orthogroups_2024-Update
Solyc08g016080 No alias high chlorophyll fluorescence phenotype 173 (AHRD V3.3... 0.08 Orthogroups_2024-Update
Sopen08g006330 No alias NADH(P)-binding 0.08 Orthogroups_2024-Update
evm.model.tig00020830.55 No alias (at1g16720 : 103.0) Encodes HCF173, a protein with weak... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 291 398
IPR016040 NAD(P)-bd_dom 150 244
IPR016040 NAD(P)-bd_dom 450 531
No external refs found!