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  5. Glyma.08G245000

Glyma.08G245000


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G245000
Cluster HCCA clusters: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.04 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.04 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.04 Orthogroups_2024-Update
At1g09200 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.04 Orthogroups_2024-Update
At3g27360 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.02 Orthogroups_2024-Update
At5g10390 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.04 Orthogroups_2024-Update
At5g10400 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
At5g65360 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.05 Orthogroups_2024-Update
Bradi2g27720 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03430.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.D00649.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Brara.H02834.1 No alias histone *(H3) 0.05 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g267950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G078314 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G130079 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G176358 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G355773 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G073150.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
HORVU7Hr1G012820.2 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_24261g0010 No alias (at5g10980 : 255.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_475294g0010 No alias (at5g65360 : 226.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_561217g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_74555g0010 No alias (at5g65360 : 127.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00010790-RA No alias (at5g65360 : 186.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G028800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Potri.T159501 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Seita.3G227400.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Seita.7G095500.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Sobic.009G178900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.04 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.03 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc02g077480 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc04g074580 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.03 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004797 thymidine kinase activity IEP Predicted GO
MF GO:0019136 deoxynucleoside kinase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019206 nucleoside kinase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!