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  5. Glyma.08G247300

Glyma.08G247300


Description : plastid transcription factor 1


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G247300
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
At3g15030 No alias TCP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD44] 0.03 Orthogroups_2024-Update
Bradi2g20060 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.02 Orthogroups_2024-Update
Brara.B01816.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E01256.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02835.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G161400 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 Orthogroups_2024-Update
Glyma.12G208800 No alias TCP family transcription factor 4 0.05 Orthogroups_2024-Update
Glyma.13G292500 No alias TCP family transcription factor 4 0.04 Orthogroups_2024-Update
Glyma.19G030900 No alias plastid transcription factor 1 0.04 Orthogroups_2024-Update
Glyma.19G044400 No alias TCP family transcription factor 0.05 Orthogroups_2024-Update
Potri.011G096600 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.T146100 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
Sobic.002G198400.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g006980 No alias TCP transcription factor 22 0.03 Orthogroups_2024-Update
Solyc12g014140 No alias SlTCP3 0.03 Orthogroups_2024-Update
Sopen03g034080 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Sopen07g027370 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update
Sopen08g015840 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Sopen12g005920 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 54 184
No external refs found!