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  5. Glyma.08G250800

Glyma.08G250800


Description : AGAMOUS-like 8


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G250800
Cluster HCCA clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_26362 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At1g77950 No alias AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6] 0.04 Orthogroups_2024-Update
At3g61120 No alias Agamous-like MADS-box protein AGL13... 0.03 Orthogroups_2024-Update
Bradi1g48520 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi2g30530 No alias AGAMOUS-like 23 0.02 Orthogroups_2024-Update
Bradi4g39420 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Brara.C04645.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03965.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G179300 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.04 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.05 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
HORVU0Hr1G032300.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.04 Orthogroups_2024-Update
HORVU1Hr1G008300.3 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G029220.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G026650.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G066140.9 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.04 Orthogroups_2024-Update
LOC_Os01g66030 No alias OsMADS2 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g11414 No alias OsMADS58 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g41370 No alias OsMADS18 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g41960 No alias OsMADS37 - MADS-box family gene with MIKC* type-box, expressed 0.03 Orthogroups_2024-Update
PSME_00013164-RA No alias (at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all... 0.02 Orthogroups_2024-Update
Potri.003G119700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Potri.008G041500 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Potri.009G084100 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Seita.3G073000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G258000.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Sobic.003G406800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g105800 No alias MADS box transcription factor (AHRD V1 **--... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002487 TF_Kbox 84 170
IPR002100 TF_MADSbox 10 57
No external refs found!