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  5. Glyma.08G252650

Glyma.08G252650


Description : auxin transport protein (BIG)


Gene families : OG_42_0003188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G252650
Cluster HCCA clusters: Cluster_496

Target Alias Description ECC score Gene Family Method Actions
At3g02260 No alias Auxin transport protein BIG... 0.04 Orthogroups_2024-Update
Bradi4g08567 No alias auxin transport protein (BIG) 0.07 Orthogroups_2024-Update
Kfl00244_0050 kfl00244_0050_v1.1 (at3g02260 : 865.0) Calossin-like protein required for... 0.03 Orthogroups_2024-Update
LOC_Os09g07300 No alias BIG, putative, expressed 0.03 Orthogroups_2024-Update
MA_10425891g0010 No alias (at3g02260 : 1886.0) Calossin-like protein required for... 0.02 Orthogroups_2024-Update
Mp2g04600.1 No alias BIG auxin transport regulator protein 0.03 Orthogroups_2024-Update
Seita.2G154800.1 No alias regulatory protein *(BIG) of auxin transport 0.05 Orthogroups_2024-Update
Sobic.007G098500.1 No alias regulatory protein *(BIG) of auxin transport 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4 1363 2268
No external refs found!